Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs2658778 chr11:93148948 C/G 5.23E-5 111 6.13 14.13 16.27 KM Plot
LAML rs2658779 chr11:93163137 G/T 5.06E-5 111 16.3 13.1 6.13 KM Plot
LAML rs2658781 chr11:93166368 C/T 5.06E-5 111 16.3 13.1 6.13 KM Plot
LAML rs2658782 chr11:93166731 T/G 5.06E-5 111 6.13 13.1 16.3 KM Plot
LAML rs2658791 chr11:93198983 T/C 5.8E-5 109 6.13 12.17 16.3 KM Plot
LAML rs2688497 chr3:195476085 C/T 0.000125 111 16.23 15.17 1.03 KM Plot
LAML rs2691541 chr7:77964474 C/G 3.61E-7 111 13.2 15.77 0.5 KM Plot
LAML rs2691542 chr7:77964528 T/C 3.61E-7 111 0.5 15.77 13.2 KM Plot
LAML rs2730655 chr12:51513355 G/A 6.15E-5 109 3 16.23 17.23 KM Plot
LAML rs2769488 chr13:71374153 C/G 1.89E-5 110 0 5 16.27 KM Plot
LAML rs2769489 chr13:71370928 A/G 1.89E-5 110 0 5 16.27 KM Plot
LAML rs2769492 chr13:71359346 A/G 1.89E-5 110 0 5 16.27 KM Plot
LAML rs2783107 chr13:21837532 C/A 2.24E-8 106 16.23 12.2 0 KM Plot
LAML rs2821217 chr1:203538486 G/T 0.000176 111 15.67 17.73 4.1 KM Plot
LAML rs28387107 chr2:127422830 T/TGA 0.000153 111 15.23 13.1 0 KM Plot